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Tutorials:

  • Using CellTypist for cell type classification
  • Using CellTypist for multi-label classification
  • Best practice in large-scale cross-dataset label transfer using CellTypist

API (classification):

  • Training function
  • Prediction function
  • Dot plot function
  • Model download function
  • Downsampling function

Package organization:

  • Prediction result
  • Classifier structure
  • Model structure
celltypist
  • Overview: module code

All modules for which code is available

  • celltypist.annotate
  • celltypist.classifier
  • celltypist.models
  • celltypist.plot
  • celltypist.samples
  • celltypist.train

© Copyright 2025, Chuan Xu.

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